AVDB

Gene ALMS1 Details

It offers a comprehensive overview of all clinically relevant variants linked to a specified gene. It provides detailed metrics for each variant, including chromosomal position, HGVS c. and p. notation, allele frequencies, carrier rates, and estimated metrics for at-risk couples. By combining gene-level statistics with specific variant-level data, this page enables an in-depth analysis of how particular genes contribute to disease, thus supporting both clinical interpretation and research efforts.

Gene: ALMS1

Disorder: Alstrom syndrome

Allele Frequency: 0.00251256

Carrier Rate: 0.0050125

Max At-Risk Couples rate: 0.0000251

The table below lists all clinically relevant variants identified in the ALMS1 gene based on the Emirati cohort dataset.

id Chromosome Position Gene Name HGVS c. (Clinically Relevant) HGVS p. (Clinically Relevant) Allele Count Allele Frequency
611 73613184 ALMS1 NM_015120.4:c.188delA NP_055935.4:p.Gln63Argfs*6 1 0.000419%
612 73650038 ALMS1 NM_015120.4:c.700C>T NP_055935.4:p.Gln234Ter 1 0.000419%
613 73675976 ALMS1 NM_015120.4:c.2321_2418del NP_055935.4:p.Pro774Leufs*2 1 0.000419%
614 73676949 ALMS1 NM_015120.4:c.3292C>T NP_055935.4:p.Gln1098Ter 1 0.000419%
615 73786172 ALMS1 NM_015120.4:c.10284dupT NP_055935.4:p.Lys3429Ter 1 0.000419%
616 73800108 ALMS1 NM_015120.4:c.11101C>T NP_055935.4:p.Arg3701Ter 1 0.000419%