AVDB

Gene GAA Details

It offers a comprehensive overview of all clinically relevant variants linked to a specified gene. It provides detailed metrics for each variant, including chromosomal position, HGVS c. and p. notation, allele frequencies, carrier rates, and estimated metrics for at-risk couples. By combining gene-level statistics with specific variant-level data, this page enables an in-depth analysis of how particular genes contribute to disease, thus supporting both clinical interpretation and research efforts.

Gene: GAA

Disorder: Glycogen storage disease II

Allele Frequency: 0.0041876

Carrier Rate: 0.00834014

Max At-Risk Couples rate: 0.0000696

The table below lists all clinically relevant variants identified in the GAA gene based on the Emirati cohort dataset.

id Chromosome Position Gene Name HGVS c. (Clinically Relevant) HGVS p. (Clinically Relevant) Allele Count Allele Frequency
122 78086801 GAA NM_000152.4:c.2015G>A p.Arg672Gln 3 0.001256%
225 78083742 GAA NM_000152.4:c.1327-2A>G p.? 2 0.000838%
226 78092588 GAA NM_000152.5:c.2783A>G p.Tyr928Cys 2 0.000838%
537 78078341 GAA NM_000152.5:c.-32-13T>G 1 0.000419%
538 78079570 GAA NM_000152.5:c.569G>A NP_000143.2:p.Arg190His 1 0.000419%
539 78086673 GAA NM_000152.5:c.1889-2A>G 1 0.000419%