AVDB

Gene PANK2 Details

It offers a comprehensive overview of all clinically relevant variants linked to a specified gene. It provides detailed metrics for each variant, including chromosomal position, HGVS c. and p. notation, allele frequencies, carrier rates, and estimated metrics for at-risk couples. By combining gene-level statistics with specific variant-level data, this page enables an in-depth analysis of how particular genes contribute to disease, thus supporting both clinical interpretation and research efforts.

Gene: PANK2

Disorder: Neurodegeneration with brain iron accumulation 1

Allele Frequency: 0.00167504

Carrier Rate: 0.00334447

Max At-Risk Couples rate: 0.0000112

The table below lists all clinically relevant variants identified in the PANK2 gene based on the Emirati cohort dataset.

id Chromosome Position Gene Name HGVS c. (Clinically Relevant) HGVS p. (Clinically Relevant) Allele Count Allele Frequency
253 3888768 PANK2 NM_153638.4:c.828_829delTG NP_705902.2:p.Cys276Trpfs*15 2 0.000838%
254 3897603 PANK2 NM_153638.4:c.1442G>C p.Arg481Pro 2 0.000838%