AVDB

Gene SPTA1 Details

It offers a comprehensive overview of all clinically relevant variants linked to a specified gene. It provides detailed metrics for each variant, including chromosomal position, HGVS c. and p. notation, allele frequencies, carrier rates, and estimated metrics for at-risk couples. By combining gene-level statistics with specific variant-level data, this page enables an in-depth analysis of how particular genes contribute to disease, thus supporting both clinical interpretation and research efforts.

Gene: SPTA1

Disorder: Spherocytosis

Allele Frequency: 0.00167504

Carrier Rate: 0.00334447

Max At-Risk Couples rate: 0.0000112

The table below lists all clinically relevant variants identified in the SPTA1 gene based on the Emirati cohort dataset.

id Chromosome Position Gene Name HGVS c. (Clinically Relevant) HGVS p. (Clinically Relevant) Allele Count Allele Frequency
150 158648224 SPTA1 NM_003126.4:c.779T>C p.Leu260Pro 2 0.000838%
313 158613314 SPTA1 NM_003126.4:c.4339-99C>T 1 0.000419%
314 158651386 SPTA1 NM_003126.4:c.460_462dupTTG NP_003117.2:p.Leu155dup 1 0.000419%